Monday, February 4, 2013

Chapter outline: Life at High Temperature


Proposed title:  Life at High Temperature    Chapter no.: _______

Author(s):       Brian P. Hedlund

                        Greg Fullmer Associate Professor of Life Sciences

School of Life Sciences, University of Nevada Las Vegas

                        89154 Las Vegas, NV, USA

                        Phone:  702-895-0809

Fax: 702-895-3956       

                        E-mail: brian.hedlund@unlv.edu

 

                        Jeremy A. Dodsworth

School of Life Sciences, University of Nevada Las Vegas

                        89154 Las Vegas, NV, USA

                        Phone:  702-895-0809

Fax: 702-895-3956       

                        E-mail: jeremy.dodsworth@unlv.edu

 

                        Chuanlun Zhang

Department of Marine Sciences, University of Georgia

166 Marine Sciences Building

Athens, GA 30602-3636

                        Phone:  (706) 542-3034

                        FAX Number: (706) 542-5888

                        archaea.zhang@gmail.com

 

Proposed topics

1) Diversity of high temperature environments.

- Continental (liquid water and vapor-condensation systems; volcanically active areas, tectonically driven systems, influence of climate and hydrologic setting, deep subsurface).

- Marine (on-axis, off-axis systems). - Other systems (briefly: coal piles, compost, industrial cooling and heating, subsurface).

2) Definitions, upper temperature limits of domains, and polyextremophiles.

- Hyperthermophiles and thermophiles - distinguishing growth from survival. - Upper temperature limits of domains.

- Polyextremophiles and their habitats - thermoacidophiles, thermophilic piezophiles.

3) Diversity of extremely and moderately thermophilic microorganisms: Archaea, Bacteria, and Eukarya.

      - Phylogenetic diversity - transition to specific thermophilic lineages around 80°C.

      - Physiological diversity.

4) Modes of adaptation of microorganisms to life at high temperature.

      - Nucleic acids (positive supercoiling, GC content in nontranscribed RNAs)

- Lipids (membrane-spanning lipids, cyclization, ether  and ester linkages)

      - Proteins

      - Adaptations to instability of small molecules

      - Cytoplasm (compatible solutes)

5) Effect of high temperature on microbial community diversity and structure.

      - Increase in temperature leads to loss of diversity, simplification of communities.

      - Quantitative relationships between high temperature and microbial diversity.

      - Loss of diversity translates into loss of ecosystem functions.

6) Effect of temperature on ecosystem functioning and biogeochemical cycles.

      - Photosynthetic/chemosynthetic transition.

      - Carbon cycle. Distinguishing features of the high temperature cycle.

      - Nitrogen cycle. Distinguishing features of the high temperature cycle.

7) Recent developments and future directions.

      - Impact of genomics approaches (e.g. “dark matter” lineages)

      - Need for more in situ measurements (from biomarkers to activities)

      - Need for more dynamic studies (from snapshots to movies)

  

Chapter Highlights

The following concepts will be conveyed in this chapter:

1. The high temperature biome is extensive and diverse. It is inhabited by a physiologically and phylogenetically diverse group of microorganisms. Above ~80°C the microbial community is composed entirely of thermophilic phylum- and class-level lineages.

2. A variety of molecular adaptations to high temperature exist, including adaptations to protect macromolecules (nucleic acids, lipids, and proteins), to decrease molecular motion in the cytoplasm, and to address the instability of small molecules at high temperature.

3. High temperature leads to a loss of diversity, which leads to loss of ecosystem function, including a key transition from photosynthetic communities to chemosynthetic communities. Temperature impacts all biogeochemical cycles in ways that are currently poorly understood.

4. Current and future advancements include the discovery of the function of major, uncultivated lineages, so-called “biological dark matter,” and an increased focus on the effect of high temperature on ecosystem function.

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